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From Saccharomyces cerevisiae to Candida glabrata in a few easy steps: important adaptations for an opportunistic pathogen
Roetzer A, Gabaldón T, Schüller C. (2011) From Saccharomyces cerevisiae to Candida glabrata in a few easy steps: important adaptations for an opportunistic pathogen. FEMS Microbiol Lett. 314(1):1-9...
Assigning duplications to relative temporal scales in genome-wide studies
Huerta-Cepas J, Gabaldón T (2011) Assigning duplications to relative temporal scales in genome-wide studies. Bioinformatics 27(1):38-45...
PhylomeDB v3.0: An expanding repository of genome-wide collections of phylogenies, alignments and orthology and paralogy predictions
Huerta-Cepas J, Capella-Gutiérrez S, Pryszcz LP, Denisov I, Kormes D, Marcet-Houben M, Gabaldón T. (2011) PhylomeDB v3.0: An expanding repository of genome-wide collections of phylogenies, alignments and orthology and paralogy predictions. Nucleic Acid Res. 39(Database issue):D556-60...
MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score
Pryszcz LP, Huerta-Cepas J, Gabaldón T. (2011) MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score. Nucleic Acid Res. 39(5):e32...
Predicting phenotypic traits of prokaryotes from protein domain frequencies
Lingner T, Mühlhausen S, Gabaldón T, Notredame C, Meinicke P. (2010). Predicting phenotypic traits of prokaryotes from protein domain frequencies. BMC Bioinformatics. 11:481...
