Publications

All publications

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Simple large-scale quantitative phenotyping and antimicrobial susceptibility testing with Q-PHAST

Nunez-Rodriguez JC, Schikora-Tamarit MÀ, Ksiezopolska E, Gabaldón T. Simple large-scale quantitative phenotyping and antimicrobial susceptibility testing with Q-PHAST. Nat Protoc. 2026 Jan;21(1):140-159. doi: 10.1038/s41596-025-01179-z. Epub 2025 May 12. PMID: 40355749. ...

Uncovering actionable trade-offs of antifungal resistance in a yeast pathogen

Nunez-Rodriguez JC, Schikora-Tamarit MÀ, Gabaldón T. Uncovering actionable trade-offs of antifungal resistance in a yeast pathogen. Mol Syst Biol. 2026 Jan 12. doi: 10.1038/s44320-025-00185-3. Epub ahead of print. PMID: 41526499. ...

MeTAline: enabling reproducible and scalable metagenomic analyses

Khannous-Lleiffe O, Fuentes-Palacios D, Májer D, Gabaldón T. MeTAline: enabling reproducible and scalable metagenomic analyses. NAR Genom Bioinform. 2025 Nov 22;7(4):lqaf158. doi: 10.1093/nargab/lqaf158. PMID: 41278541; PMCID: PMC12639245. ...

Phylogeny-aware Simulations Suggest a Low Impact of Unsampled Lineages in the Inference of Gene Flow During Eukaryogenesis

Bernabeu M, Manzano-Morales S, Gabaldón T. Phylogeny-aware Simulations Suggest a Low Impact of Unsampled Lineages in the Inference of Gene Flow During Eukaryogenesis. Genome Biol Evol. 2025 Oct 29;17(11):evaf190. doi: 10.1093/gbe/evaf190. PMID: 41063607; PMCID: PMC12573248. ...

Una toxina, la nueva pista en cáncer de colon (El Mundo – 24/04/2025)

Original: https://www.elmundo.es/ciencia-y-salud/salud/2025/04/23/6808b993fdddff2a3f8b458e.html ...