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Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence
Marcet-Houben M. Marccedu G, and Gabaldón T. (2009). Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence. BMC Evol. Biology. 9:295. ...
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Capella-Gutíerrez S, Silla-Martínez JM and Gabaldón T. (2009) trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25(15)1972-3. ...
The tree versus the forest: the fungal tree of life and the topological diversity within the yeast phylome
Marcet-Houben M and Gabaldón T. (2009) The tree versus the forest: the fungal tree of life and the topological diversity within the yeast phylome. PLoS ONE. 2009;4(2):e4357. ...
Large-scale assignment of orthology: back to phylogenetics?
Gabaldón T. (2008). Large-scale assignment of orthology: back to phylogenetics?. Genome Biology 2008. 9:235. ...
PhylomeDB: a database for genome-wide collections of gene phylogenies
Huerta-Cepas J., Bueno A, Dopazo J and Gabaldón, T. (2008). PhylomeDB: a database for genome-wide collections of gene phylogenies. Nucleic Acids Res 36:D491-6. ...
